Desk encyclopedia of general virology

Adansonian system, classification 90 Adaptive immune system 366History of Virology: Bacteriophages H-W Ackermann 3 History of Virology: Plant Viruses R Hull 10 History of Virology: Vertebrate Viruses F Fenner 15 Nature of Viruses M H V van Regenmortel 19 Origin of Viruses P Forterre 23 Ribozymes E Westhof and A Lescoute 30 Virus Species M H V van Regenmortel 37 Quasispecies R Sanjua´n 42 Virus Databases E J Lefkowitz, M R Odom and C Upton 49 Phylogeny of Viruses A E Gorbalenya 66 Evolution of Viruses L P Villarreal 70 Taxonomy, Classification and Nomenclature of Viruses C M Fauquet 80 Virus Classification by Pairwise Sequence Comparison (PASC) Y Bao, Y Kapustin and T Tatusova 95 Prions of Vertebrates J D F Wadsworth and J Collinge 101 Viruses and Bioterrorism R F Meyer and S A Morse 107 SECTION II: VIRIONS Principles of Virion Structure J E Johnson and J A Speir 115 Structure of Non-Enveloped Virions J A Speir and J E Johnson 123 Electron Microscopy of Viruses G Schoehn and R W H Ruigrok 136 Cryo-Electron Microscopy W Chiu, J T Chang and F J Rixon 145 Assembly of Non-Enveloped Virions M Luo 156 Assembly of Enveloped Virions C K Navaratnarajah, R Warrier and R J Kuhn 160 xvAssembly of Bacterial Viruses S Casjens 167 Genome Packaging in Bacterial Viruses P Jardine 175 Viral Membranes J Lenard 181 Mimivirus J-M Claverie 188 SECTION III: NUCLEIC ACIDS Recombination J J Bujarski 199 Satellite Nucleic Acids and Viruses P Palukaitis, A Rezaian and F Garcı´a-Arenal 207 Retrotransposons of Vertebrates A E Peaston 217 Defective-Interfering Viruses L Roux 226 Interfering RNAs K E Olson, K M Keene and C D Blair 230 Viruses as Vectors in Gene Therapy K I Berns and T R Flotte 236 SECTION IV: VIRUS INFECTION Viral Receptors D J Evans 245 Virus Entry to Bacterial Cells M M Poranen and A Domanska 250 Membrane Fusion A Hinz and W Weissenhorn 256 Replication of Viruses A J Cann 265 Persistent and Latent Viral Infection E S Mocarski and A Grakoui 271 Apoptosis and Virus Infection J R Clayton and J M Hardwick 279 Viral Pathogenesis N Nathanson 287 Antiviral Agents H J Field and R A Vere Hodge 292 Diagnosis Using Serological and Molecular Approaches R Vainionpa¨ a¨ and P Leinikki 304 Diagnosis Using Microarrays K Fischer, A Urisman and J DeRisi 311 Disease Surveillance N Noah 315 SECTION V: IMMUNE RESPONSES Innate Immunity F Weber 325 Defeating Innate Immunity C F Basler 331 Antigen Presentation E I Zuniga, D B McGavern and M B A Oldstone 338 Antigenicity and Immunogenicity of Viral Proteins M H V van Regenmortel 343 Cytokines and Chemokines D E Griffin 349 Cell-Mediated Immunity to Viruses A J Zajac and L E Harrington 354 Antibody-Mediated Immunity to Viruses A R Neurath 361 Orthomyxovirus Antigen Structure R J Russell 376 Vaccine Strategies I Kusters and J W Almond 381 DNA Vaccines S Babiuk and L A Babiuk 390SECTION VI: DESCRIPTION AND MOLECULAR BIOLOGY OF SOME VIRUSES Adenoviruses: Molecular Biology K N Leppard 419 Baculoviruses: Molecular Biology of Granuloviruses S Hilton 426 Baculoviruses: Molecular Biology of Nucleopolyhedroviruses D A Theilmann and G W Blissard 434 Coronaviruses: Molecular Biology S C Baker 445 Hepatitis B Virus: Molecular Biology T J Harrison 453 Herpes Simplex Viruses: Molecular Biology E K Wagner and R M Sandri-Goldin 460 Human Cytomegalovirus: Molecular Biology W Gibson 469 Human Immunodeficiency Viruses: Molecular Biology J Votteler and U Schubert 474 Iridoviruses V G Chinchar and A D Hyatt 481 Kaposi’s Sarcoma-Associated Herpesvirus: Molecular Biology E Gellermann and T F Schulz 488 Mononegavirales A J Easton and R Ling 495 Nidovirales L Enjuanes, A E Gorbalenya, R J de Groot, J A Cowley, J Ziebuhr and E J Snijder 505 Nodaviruses P A Venter and A Schneemann 516 Orthomyxoviruses: Molecular Biology M L Shaw and P Palese 524 Antigenic Variation G M Air and J T West 530 Papillomaviruses: Molecular Biology of Human Viruses P F Lambert and A Collins 540 Partitiviruses S A Ghabrial, W F Ochoa, T S Baker and M L Nibert 548 Phycodnaviruses J L van Etten and M V Graves 556 Picornaviruses: Molecular Biology B L Semler and K J Ertel 565 Reoviruses: Molecular Biology K M Coombs 577 Seadornaviruses H Attoui and P P C Mertens 586 Tetraviruses J A Speir and J E Johnson 597 Togaviruses: Molecular Biology K D Ryman, W B Klimstra and S C Weaver 606 Index 615